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Redi: A simulator of stochastic biochemical reaction-diffusion systems
Conference proceeding   Peer reviewed

Redi: A simulator of stochastic biochemical reaction-diffusion systems

Paola Lecca, L Dematté, A Ihekwaba and C Priami
2010 Second International Conference on Advances in System Simulation, pp.82-87
2nd International Conference on Advances in System Simulation (SIMUL 2010) (Nice, 22/08/2010 - 27/08/2010)
2010
DOI: https://doi.org/10.1109/SIMUL.2010.14
Handle:
https://hdl.handle.net/10863/34281

Abstract

CoSBiLab Redi Bicoid gradient Reaction diffusion systems Drosophila embryo Stochastic Simulation
We present a new model of anisotropic reaction- diffusion systems and the algorithmic framework of the soft- ware Redi (Reaction-Diffusion simulator) that implements this model. As illustrative application, we show the ability of Redi to reproduce the observed dynamics of the bicoid protein gradient in the Drosophila Melanogaster embryo. © 2010 IEEE.
url
https://ieeexplore.ieee.org/document/5601894View

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